miRBase entry: bfl-mir-2062

Stem-loop bfl-mir-2062


Accession
MI0010497
Description
Branchiostoma floridae bfl-mir-2062 precursor miRNA
Gene family
MIPF0001753; mir-2062


Sequence

ccugcucUGCAACAAUAUUUCAUCAGUGGugaacuccaaaaucuACUGGUGAAAUGUAGUUGCGUAggaggccggccacugu
(((.((.((((((.(((((((((((((((.............))))))))))))))).)))))).)).)))...........

Structure
-----------   g  c      A               ugaac 
           ccu cu UGCAAC AUAUUUCAUCAGUGG     u
           ||| || |||||| |||||||||||||||     c
           gga gA GCGUUG UGUAAAGUGGUCAuc     c
ugucaccggcc   g  U      A               uaaaa 


Annotation confidence Not enough data
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Genome context
GG666582.1: 2072211-2072292 [-]

Database links

Mature bfl-miR-2062-5p

Accession MIMAT0009988
Description Branchiostoma floridae bfl-miR-2062-5p mature miRNA
Sequence 8 - UGCAACAAUAUUUCAUCAGUGG - 29
Evidence experimental
cloned [1], 454 [2]

Mature bfl-miR-2062-3p

Accession MIMAT0019169
Description Branchiostoma floridae bfl-miR-2062-3p mature miRNA
Sequence 45 - ACUGGUGAAAUGUAGUUGCGUA - 66
Evidence experimental
454 [2]

References

  1. PubMed ID: 19196332
    Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution
    "Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L"
    "Evol Dev (2009) 11:41-49

  2. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27