Stem-loop bfl-mir-2059

Accession

MI0010494

Description

Branchiostoma floridae bfl-mir-2059 precursor miRNA

Gene family

MIPF0001683; mir-2059

Sequence

cauuuguguuggaccccuuuCAAGGCAAAUUGCUGCAAUACUuuguauccugcaagUAUUGCACUUUUUUGCUUUGAaaggu
...............((((((((((((((....((((((((((.(((...)))))))))))))....)))))))))))))).

Structure

cauuuguguuggacc              UUGC          u   u 
               ccuuuCAAGGCAAA    UGCAAUACUu gua  
               ||||||||||||||    |||||||||| ||| c
               ggaaAGUUUCGUUU    ACGUUAUgaa cgu  
--------------u              UUUC          -   c 

Annotation confidence Not enough data

Genome context

GG666525.1: 1619205-1619286 [+]

Mature bfl-miR-2059-3p

• Accession: MIMAT0009985
• Description: Branchiostoma floridae bfl-miR-2059-3p mature miRNA
• Sequence: 57 - UAUUGCACUUUUUUGCUUUGA - 77
• Evidence: experimental ; cloned [1], 454 [2]

Mature bfl-miR-2059-5p

• Accession: MIMAT0019168
• Description: Branchiostoma floridae bfl-miR-2059-5p mature miRNA
• Sequence: 21 - CAAGGCAAAUUGCUGCAAUACU - 42
• Evidence: experimental ; 454 [2]

References

1. PubMed ID: 19196332
   Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution
   "Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L"
   "Evol Dev (2009) 11:41-49


2. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27