miRBase entry: bta-mir-1839

Stem-loop bta-mir-1839


Accession
MI0010473
Description
Bos taurus bta-mir-1839 precursor miRNA
Gene family
MIPF0000702; mir-1839

Literature search
3 open access papers mention bta-mir-1839
(6 sentences)

Sequence

10367 reads, 210 reads per million, 74 experiments
aaugaaAAGGUAGAUAGAACAGGUCUUGUUugcaaaaugaauucaugaccuacauaucuaccaacagcaaug
........((((((((....(((((.((....((...))....)).)))))...))))))))..........

Structure
--aaugaaAA        GAAC     U  UUug  a 
          GGUAGAUA    AGGUC UG    ca  
          ||||||||    ||||| ||    || a
          ccaucuau    uccag ac    gu  
guaacgacaa        -aca     u  uuaa  a 


Annotation confidence Not enough data
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Genome context
chr14: 1928039-1928110 [-]

Database links

Mature bta-miR-1839

Accession MIMAT0009968
Description Bos taurus bta-miR-1839 mature miRNA
Sequence 7 - AAGGUAGAUAGAACAGGUCUUGUU - 30
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125

  2. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026