miRBase entry: bta-mir-1193

Stem-loop bta-mir-1193


Accession
MI0010469
Description
Bos taurus bta-mir-1193 precursor miRNA
Gene family
MIPF0000714; mir-1193


Sequence

1 reads, 1 reads per million, 1 experiments
ccagccgcucuccaggguagcugaggggaugguaggccggugacgugcacuucauuuacgaugUAGGUCACCCGUUUGACUAUCcaccagcacccaguccaucug
..............((((.((((.(.(((((((((((.((((((.((((..((......)))))).)))))).)))).))))))).)))))))))..........

Structure
ccagccgcucucca    a    a g       -    c      g    cu  au 
              gggu gcug g ggauggu aggc ggugac ugca  uc  u
              |||| |||| | ||||||| |||| |||||| ||||  ||   
              ccca cgac c cCUAUCA UUUG CCACUG AUgu  ag  u
----gucuaccuga    -    - a       G    C      G    --  ca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr21: 67848381-67848485 [+]
Clustered miRNAs
21 other miRNAs are < 10 kb from bta-mir-1193
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-1193

Accession MIMAT0009965
Description Bos taurus bta-miR-1193 mature miRNA
Sequence 64 - UAGGUCACCCGUUUGACUAUC - 84
Evidence not_experimental

References

  1. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125