miRBase entry: bta-mir-1296

Stem-loop bta-mir-1296


Accession
MI0010468
Description
Bos taurus bta-mir-1296 precursor miRNA
Gene family
MIPF0000649; mir-1296

Literature search
2 open access papers mention bta-mir-1296
(5 sentences)

Sequence

921 reads, 129 reads per million, 64 experiments
ccuaccuaacugggUUAGGGCCCUGGCUCCAUCUCCuuuaggaaaaccuucuguggggaguggggcuuugacccuaaccuagcugggcugu
....((((.(((((((((((....(((((((.((((((..((((....))))..)))))))))))))....))))))))))).))))....

Structure
ccua    a           CCCU       U      ua    a 
    ccua cugggUUAGGG    GGCUCCA CUCCuu  ggaa a
    |||| |||||||||||    ||||||| ||||||  ||||  
    gggu gauccaauccc    ucggggu gagggg  ucuu c
uguc    c           aguu       -      ug    c 


Annotation confidence Not enough data
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Genome context
chr28: 19648967-19649057 [-]

Database links

Mature bta-miR-1296

Accession MIMAT0009964
Description Bos taurus bta-miR-1296 mature miRNA
Sequence 15 - UUAGGGCCCUGGCUCCAUCUCC - 36
Evidence not_experimental

References

  1. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125