Stem-loop sequence bta-mir-7-2

AccessionMI0010462 (change log)
DescriptionBos taurus miR-7-2 stem-loop
Gene family MIPF0000022; mir-7
Literature search

9 open access papers mention bta-mir-7-2
(18 sentences)

Stem-loop 
   ---    u  -      a  u        a     a       u      --     a 
5'    ugga gu uggucu gu cugugugg agacu gugauuu guuguu  uuuag u
      |||| || |||||| || |||||||| ||||| ||||||| ||||||  |||||  
3'    aucu cg accgga ca gguauacc ucuga cacuaaa caacag  aaguc a
   gac    c  u      -  c        g     -       -      cu     a
Get sequence
Deep sequencing
6006 reads, 15.5 reads per million, 71 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr8: 79020781-79020889 [-]
sense
ENSBTAT00000028162 ; HNRNPK-201; intron 16
Database links

Mature sequence bta-miR-7

Accession MIMAT0003843
Sequence

23 -  

uggaagacuagugauuuuguuguu

 - 46

Get sequence
Deep sequencing14706 reads, 66 experiments
Evidence experimental; cloned [2]
Predicted targets

References

1
PMID:18945293 "Annotation of 390 bovine miRNA genes by sequence similarity with other species" Strozzi F, Mazza R, Malinverni R, Williams JL Anim Genet. 40:125(2009).
2
PMID:19758457 "Characterization of bovine miRNAs by sequencing and bioinformatics analysis" Jin W, Grant JR, Stothard P, Moore SS, Guan LL BMC Mol Biol. 10:90(2009).