miRBase entry: bta-mir-376d

Stem-loop bta-mir-376d


Accession
MI0010445
Description
Bos taurus bta-mir-376d precursor miRNA
Gene family
MIPF0000091; mir-368

Literature search
1 open access papers mention bta-mir-376d
(1 sentences)

Sequence

66 reads, 6 reads per million, 34 experiments
gguauuuaaaagguagauuuuccuucuaugauuacggguuuggugauuaAUCAUAGAGGAAAAUCCACAUuuucgguaucaa
((((((.((((.((.(((((((((.(((((((((...(((....))))))))))))))))))))).)).)))).))))))..

Structure
--      u    g  a         u         cgg   u 
  gguauu aaaa gu gauuuuccu cuaugauua   guu g
  |||||| |||| || ||||||||| |||||||||   |||  
  cuaugg uuuU CA CUAAAAGGA GAUACUAau   uag g
aa      c    A  C         -         ---   u 


Annotation confidence Not enough data
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Genome context
chr21: 67857059-67857140 [+]
Clustered miRNAs
17 other miRNAs are < 10 kb from bta-mir-376d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-376d

Accession MIMAT0010199
Description Bos taurus bta-miR-376d mature miRNA
Sequence 50 - AUCAUAGAGGAAAAUCCACAU - 70
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39