Stem-loop bta-mir-1224

Accession

MI0010443

Description

Bos taurus bta-mir-1224 precursor miRNA

Gene family

MIPF0000440; mir-1224

Literature search

3 open access papers mention bta-mir-1224
(7 sentences)

Sequence

93 reads, 7 reads per million, 34 experiments

GUGAGGACUCGGGAGGUGGAGgguggcgcugccagggccagggcacugucucagcucgcuucuccccccaccuccucucuccucag
.((((((...(((((((((.(((.((((..((..(((.(((....))).))).)).))))...))).)))))))))...)))))).

Structure

G      CUC         A   --u    cu  ca   c   g 
 UGAGGA   GGGAGGUGG Ggg   ggcg  gc  ggg cag g
 ||||||   ||||||||| |||   ||||  ||  ||| |||  
 acuccu   uccuccacc ccc   ucgc  cg  cuc guc c
g      cuc         c   ucu    -u  -a   u   a 

Annotation confidence Not enough data

Genome context

chr1: 83839934-83840019 [-]

Mature bta-miR-1224

• Accession: MIMAT0009944
• Description: Bos taurus bta-miR-1224 mature miRNA
• Sequence: 1 - GUGAGGACUCGGGAGGUGGAG - 21
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90