Stem-loop sequence bta-mir-1224

AccessionMI0010443 (change log)
DescriptionBos taurus miR-1224 stem-loop
Gene family MIPF0000440; mir-1224
Literature search

3 open access papers mention bta-mir-1224
(7 sentences)

Stem-loop 
   g      cuc         a   --u   --    --c   g  c 
5'  ugagga   gggaggugg ggg   ggc  gcug   cag gc a
    ||||||   ||||||||| |||   |||  ||||   ||| ||  
3'  acuccu   uccuccacc ccc   ucg  cgac   guc cg g
   g      cuc         c   ucu   cu    ucu   a  g
Get sequence
Deep sequencing
152 reads, 0 reads per million, 48 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr1: 83839934-83840019 [-]
sense
ENSBTAT00000052221 ; VWA5B2-201; intron 18
Database links

Mature sequence bta-miR-1224

Accession MIMAT0009944
Sequence

1 -  

gugaggacucgggagguggag

 - 21

Get sequence
Deep sequencing150 reads, 47 experiments
Evidence experimental; cloned [2]
Predicted targets

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).
2
PMID:19758457 "Characterization of bovine miRNAs by sequencing and bioinformatics analysis" Jin W, Grant JR, Stothard P, Moore SS, Guan LL BMC Mol Biol. 10:90(2009).