miRBase entry: cfa-mir-665

Stem-loop cfa-mir-665

Accession

MI0010433

Description

Canis familiaris cfa-mir-665 precursor miRNA

Gene family

MIPF0000404; mir-665

Sequence

ucccgcggccucagccuccacccggggcucuguccggACCAGGAGGCUAAGGCCCCUcacggcggcug
..(((((((((.(((((((..(((((......)))))....))))))).))))).......))))...

Structure

-uc    -------     c       --ac     gc 
   ccgc       ggccu agccucc    ccggg  u
   ||||       ||||| |||||||    |||||   
   ggcg       CCGGA UCGGAGG    ggccu  c
guc    gcacUCC     A       ACCA     gu

Annotation confidence Not enough data

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Genome context

chr8: 69097904-69097971 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from cfa-mir-665

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-665

Accession	MIMAT0009934
Description	Canis familiaris cfa-miR-665 mature miRNA
Sequence	38 - ACCAGGAGGCUAAGGCCCCU - 57
Evidence	not_experimental

References

PubMed ID: 18215311
miRNAminer: a tool for homologous microRNA gene search
"Artzi S, Kiezun A, Shomron N"
"BMC Bioinformatics (2008) 9:39