miRBase entry: cfa-mir-653

Stem-loop cfa-mir-653


Accession
MI0010423
Description
Canis familiaris cfa-mir-653 precursor miRNA
Gene family
MIPF0000435; mir-653


Sequence

ucauuccuucaGUGUUGAAACAAUCUCUAUUGaaccaggcuccaaaccaaguucacuggaguuuguuucaauauugcaagaaugauaagau
((((((...((((((((((((((.(((((.(((((..((.......))..))))).))))).))))))))))))))...))))))......

Structure
------      cuu              U     U     ca  cu 
      ucauuc   caGUGUUGAAACAA CUCUA UGaac  gg  c
      ||||||   |||||||||||||| ||||| |||||  ||  c
      aguaag   guuauaacuuuguu gaggu acuug  cc  a
uagaau      aac              u     c     aa  aa 


Annotation confidence Not enough data
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Genome context
chr14: 18979467-18979557 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cfa-mir-653
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-653

Accession MIMAT0009924
Description Canis familiaris cfa-miR-653 mature miRNA
Sequence 12 - GUGUUGAAACAAUCUCUAUUG - 32
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39