miRBase entry: cfa-mir-376c

Stem-loop cfa-mir-376c


Accession
MI0010387
Description
Canis familiaris cfa-mir-376c precursor miRNA
Gene family
MIPF0000091; mir-368


Sequence

uuugguauuuaaaagGUGGAUAUUCCUUCUAUGUUUAuguuauuuaugguuaaacauagaggaaauuccacguuuucaguaucaaa
.((((((((.((((.(((((..(((((.(((((((((.............))))))))))))))..))))).)))).)))))))).

Structure
u        u    g     UA     U         uguua 
 uugguauu aaaa GUGGA  UUCCU CUAUGUUUA     u
 |||||||| |||| |||||  ||||| |||||||||     u
 aacuauga uuuu caccu  aagga gauacaaau     u
a        c    g     ua     -         uggua 


Annotation confidence Not enough data
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Genome context
chr8: 69270100-69270185 [+]
Clustered miRNAs
15 other miRNAs are < 10 kb from cfa-mir-376c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-376c

Accession MIMAT0009888
Description Canis familiaris cfa-miR-376c mature miRNA
Sequence 16 - GUGGAUAUUCCUUCUAUGUUUA - 37
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39