miRBase entry: cfa-mir-149

Stem-loop cfa-mir-149


Accession
MI0010383
Description
Canis familiaris cfa-mir-149 precursor miRNA
Gene family
MIPF0000274; mir-149


Sequence

gccggcgcccgggcUCUGGCUCCGUGUCUUCACUCCCguguguccgaggagggagggagggacgggggcugugcuggggcagc
....((((((.(((.(.(.((((((.(((((.(((((.(.(.....).).)))))))))).)))))).).).))).)))).))

Structure
gccg  -    g   U U G      G     A     g g g 
    gc gccc ggc C G CUCCGU UCUUC CUCCC u u u
    || |||| ||| | | |||||| ||||| ||||| | | c
    cg cggg ucg g c ggggca ggagg gaggg g a c
----  a    g   u u g      g     -     a g g 


Annotation confidence Not enough data
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Genome context
chr25: 50483520-50483602 [+]

Database links

Mature cfa-miR-149

Accession MIMAT0009884
Description Canis familiaris cfa-miR-149 mature miRNA
Sequence 15 - UCUGGCUCCGUGUCUUCACUCCC - 37
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39