miRBase entry: cfa-mir-105a

Stem-loop cfa-mir-105a

Accession

MI0010377

Description

Canis familiaris cfa-mir-105a precursor miRNA

Gene family

MIPF0000074; mir-105

Sequence

ugugcaucguagUCAAAUGCUCAGACUCCUGUgguggcugcucaugcaccacggauguuugagcaugugcuacggugucua
...(((((((((.((.((((((((((..((((((((..........))))))))..)))))))))).)))))))))))...

Structure

ugu         U  A          UC        gcug 
   gcaucguag CA AUGCUCAGAC  CUGUggug    c
   ||||||||| || ||||||||||  ||||||||     
   uguggcauc gu uacgaguuug  ggcaccac    u
auc         -  g          ua        guac

Annotation confidence Not enough data

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Genome context

chrX: 120403195-120403275 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-105a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-105a

Accession	MIMAT0009879
Description	Canis familiaris cfa-miR-105a mature miRNA
Sequence	13 - UCAAAUGCUCAGACUCCUGU - 32
Evidence	not_experimental

References

PubMed ID: 18215311
miRNAminer: a tool for homologous microRNA gene search
"Artzi S, Kiezun A, Shomron N"
"BMC Bioinformatics (2008) 9:39