miRBase entry: cfa-mir-145

Stem-loop cfa-mir-145


Accession
MI0010359
Description
Canis familiaris cfa-mir-145 precursor miRNA
Gene family
MIPF0000079; mir-145


Sequence

uguccucacgGUCCAGUUUUCCCAGGAAUCCCUuagaugcuaagauggggauuccuggaaauacuguucuugaggucaugguu
((.(((((.((..((((.((.((((((((((((.............)))))))))))).)).))))..))))))).)).....

Structure
-----  u     c  UC    U  C            uagau 
     ug ccuca gG  CAGU UU CCAGGAAUCCCU     g
     || ||||| ||  |||| || ||||||||||||     c
     ac ggagu uc  guca aa gguccuuagggg     u
uuggu  u     -  uu    u  a            uagaa 


Annotation confidence Not enough data
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Genome context
chr4: 59533128-59533210 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cfa-mir-145
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-145

Accession MIMAT0009863
Description Canis familiaris cfa-miR-145 mature miRNA
Sequence 11 - GUCCAGUUUUCCCAGGAAUCCCU - 33
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39