Stem-loop cfa-mir-301b

Accession

MI0010349

Description

Canis familiaris cfa-mir-301b precursor miRNA

Gene family

MIPF0000034; mir-130

Sequence

cccaggugcucugacgagguugcacuacugugcucugagaagCAGUGCAAUGAUAUUGUCAAAGCaucggggacca
(((.((((((.((((((.((((((((.((...........)).))))))))....)))))).)))))).)))....

Structure

----   a      c      ---g        a  gugc 
    ccc ggugcu ugacga    guugcacu cu    u
    ||| |||||| ||||||    |||||||| ||    c
    ggg cuaCGA ACUGUU    UAACGUGA ga    u
acca   g      A      AUAG        C  agag 

Annotation confidence Not enough data

Genome context

chr26: 30924103-30924178 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-301b

Mature cfa-miR-301b

• Accession: MIMAT0009854
• Description: Canis familiaris cfa-miR-301b mature miRNA
• Sequence: 43 - CAGUGCAAUGAUAUUGUCAAAGC - 65
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39