miRBase entry: cfa-mir-215

Stem-loop cfa-mir-215


Accession
MI0010343
Description
Canis familiaris cfa-mir-215 precursor miRNA
Gene family
MIPF0000063; mir-192


Sequence

uguacaggaaaAUGACCUACGAAUUGAUAGACAauuuggcuaaguuugucugucauuuuuguaggccaauauucuguau
.((((((((...((.((((((((.((((((((((.((.....)).))))))))))..)))))))).))...))))))))

Structure
u        aaA  A        -U          u  g 
 guacagga   UG CCUACGAA  UGAUAGACAa uu g
 ||||||||   || ||||||||  |||||||||| || c
 uaugucuu   ac ggauguuu  acugucuguu ga u
-        aua  c        uu          u  a 


Annotation confidence Not enough data
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Genome context
chr38: 14895108-14895186 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cfa-mir-215
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-215

Accession MIMAT0009848
Description Canis familiaris cfa-miR-215 mature miRNA
Sequence 12 - AUGACCUACGAAUUGAUAGACA - 33
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39