Stem-loop cfa-mir-34b

Accession

MI0010332

Description

Canis familiaris cfa-mir-34b precursor miRNA

Gene family

MIPF0000039; mir-34

Sequence

gugcucgguuuguAGGCAGUGUAAUUAGCUGAUUGuccucugcugcuuacaaucacuaacuccacugccaucaaaacaaggcac
(((((..((((...(((((((...((((.(((((((...(....)...)))))))))))...)))))))....))))..)))))

Structure

     cg    -guA       UAA    C       ccu u 
gugcu  guuu    GGCAGUG   UUAG UGAUUGu   c g
|||||  ||||    |||||||   |||| |||||||   |  
cacgg  caaa    ccgucac   aauc acuaaca   g c
     aa    acua       cuc    -       uuc u 

Annotation confidence Not enough data

Genome context

chr5: 21558685-21558768 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-34b

Mature cfa-miR-34b

• Accession: MIMAT0009838
• Description: Canis familiaris cfa-miR-34b mature miRNA
• Sequence: 14 - AGGCAGUGUAAUUAGCUGAUUG - 35
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39