Stem-loop spu-mir-2007

Accession

MI0010277

Description

Strongylocentrotus purpuratus spu-mir-2007 precursor miRNA

Gene family

MIPF0002094; mir-2007

Literature search

1 open access papers mention spu-mir-2007
(1 sentences)

Sequence

ucggcaucaugcauUAUUUCAGGCAGUAUACUGGUAAaggguuuuauuugcaccauucuuaccuguugcuaccugaaauuaaugcaagaugugug
...(((((.((((((((((((((.((((.((.(((((..(((.........)))....))))).)))))).))))))).))))))).)))))...

Structure

ucg     a       -       C    U  U     --ag   uuu 
   gcauc ugcauUA UUUCAGG AGUA AC GGUAA    ggu   a
   ||||| ||||||| ||||||| |||| || |||||    |||   u
   uguag acguaau aaagucc ucgu ug ccauu    cca   u
gug     a       u       a    -  u     cuua   cgu 

Annotation confidence Not enough data

Genome context

KN914133.1: 126988-127082 [-]

Mature spu-miR-2007

• Accession: MIMAT0009748
• Description: Strongylocentrotus purpuratus spu-miR-2007 mature miRNA
• Sequence: 15 - UAUUUCAGGCAGUAUACUGGUAA - 37
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68