Stem-loop spu-mir-2006

Accession

MI0010276

Description

Strongylocentrotus purpuratus spu-mir-2006 precursor miRNA

Gene family

MIPF0001936; mir-2006

Literature search

1 open access papers mention spu-mir-2006
(3 sentences)

Sequence

gccguagcaugugccaucgccaccaaguguacuucaguggacauaugucguuuuuaaaucuGAGCACACUUGGUAGCGGUGCCgugagcuacuc
...(((((.((((.((((((.(((((((((.((.(((..(((....)))..........))))).))))))))).)))))).)))).)))))..

Structure

gcc     a    c      c         a  u   --------ug   a 
   guagc ugug caucgc accaagugu cu cag          gac u
   ||||| |||| |||||| ||||||||| || |||          |||  
   caucg gugC GUGGCG UGGUUCACA GA Guc          cug a
-cu     a    C      A         C  -   uaaauuuuug   u 

Annotation confidence Not enough data

Genome context

KN914344.1: 40782-40875 [-]

Mature spu-miR-2006

• Accession: MIMAT0009747
• Description: Strongylocentrotus purpuratus spu-miR-2006 mature miRNA
• Sequence: 62 - GAGCACACUUGGUAGCGGUGCC - 83
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68