Stem-loop sequence spu-mir-2002

AccessionMI0010272 (change log)
DescriptionStrongylocentrotus purpuratus miR-2002 stem-loop
Gene family MIPF0001989; mir-2002
Stem-loop 
   uau     -  a         -   a       u    u  u  g  a 
5'    ucauc ag cugauaaga cca caggugu auuc ca gu ug u
      ||||| || ||||||||| ||| ||||||| |||| || || || g
3'    aguag uc gauuauuuu ggu gucuaca uaag gu ua ac u
   gau     c  g         u   c       -    u  c  g  a
Get sequence
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (Spur_4.2; GCA_000002235.3) Overlapping transcripts
KN916283.1: 1144519-1144614 [+]
intergenic
Clustered miRNAs
< 10kb from spu-mir-2002
spu-mir-2002KN916283.1: 1144519-1144614 [+]
spu-mir-34KN916283.1: 1153963-1154063 [+]
Database links

Mature sequence spu-miR-2002-5p

Accession MIMAT0019165
Previous IDsspu-miR-2002*
Sequence

18 -  

agaccaacagguguuauucuca

 - 39

Get sequence
Evidence experimental; 454 [2]

Mature sequence spu-miR-2002-3p

Accession MIMAT0009743
Previous IDsspu-miR-2002
Sequence

59 -  

ugaauacaucugcugguuuuuau

 - 81

Get sequence
Evidence experimental; 454 [1]

References

1
PMID:19196333 "The deep evolution of metazoan microRNAs" Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ Evol Dev. 11:50-68(2009).
2
PMID:21210939 "microRNA complements in deuterostomes: origin and evolution of microRNAs" Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M Evol Dev. 13:15-27(2011).