miRBase entry: spu-mir-2012

Stem-loop spu-mir-2012


Accession
MI0010270
Description
Strongylocentrotus purpuratus spu-mir-2012 precursor miRNA
Gene family
MIPF0000720; mir-2012

Literature search
1 open access papers mention spu-mir-2012
(2 sentences)

Sequence

uggguucuugaUAGUACUGGCAUAUGGACAUUGuuguaauaaucuuacucucaauguucaucuguccguacugccaagugccug
.((((.((((.((((((.((((.((((((((((..((((.....))))...)))))))))).)))).)))))).)))).)))).

Structure
u    u    a      U    U          -uu    u 
 gggu cuug UAGUAC GGCA AUGGACAUUG   guaa a
 |||| |||| |||||| |||| ||||||||||   |||| a
 uccg gaac gucaug cugu uacuuguaac   cauu u
g    u    c      c    c          ucu    c 


Annotation confidence Not enough data
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Genome context
KN913421.1: 189027-189110 [+]

Database links

Mature spu-miR-2012

Accession MIMAT0009741
Description Strongylocentrotus purpuratus spu-miR-2012 mature miRNA
Sequence 12 - UAGUACUGGCAUAUGGACAUUG - 33
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68