miRBase entry: cte-mir-2000

Stem-loop cte-mir-2000


Accession
MI0010240
Description
Capitella teleta cte-mir-2000 precursor miRNA


Sequence

cuucgcauuucuuaccuggaaguugggauggcuuuuauuuacaucuuguaAAAGUCUUCACUACUUUCAGUUcggagaugugucu
...(((((((((...((((((((.((((.(((((((((.........))))))))).)).))))))))))...)))))))))...

Structure
cuu         uac        u  -  u         uua 
   cgcauuucu   cuggaagu gg ga ggcuuuuau   c
   |||||||||   |||||||| || || |||||||||   a
   guguagagg   GACUUUCA UC CU CUGAAAaug   u
ucu         cUU        -  A  U         uuc 


Annotation confidence Not enough data
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Genome context
KB299619.1: 172448-172532 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cte-mir-2000
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cte-miR-2000

Accession MIMAT0009711
Description Capitella teleta cte-miR-2000 mature miRNA
Sequence 51 - AAAGUCUUCACUACUUUCAGUU - 72
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68