miRBase entry: sko-mir-375

Stem-loop sko-mir-375


Accession
MI0010219
Description
Saccoglossus kowalevskii sko-mir-375 precursor miRNA
Gene family
MIPF0000114; mir-375


Sequence

ccgguguuguuggauuguccgggccccacgaucauggcuuauagcguaaacgcUUUGUUCGUUCGGCUCGCGCGAcuuaauaacacgau
...((((((((((.((((.((((((..((((.((.(((.............))).)).))))..)))))).)))).))))))))))...

Structure
ccg          a    c      cc    u  u   uuaua 
   guguuguugg uugu cgggcc  acga ca ggc     g
   |||||||||| |||| ||||||  |||| || |||     c
   cacaauaauu AGCG GCUCGG  UGCU GU Ucg     g
uag          c    C      CU    U  U   caaau 


Annotation confidence Not enough data
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Genome context
GL012220.1: 935583-935671 [+]

Database links

Mature sko-miR-375

Accession MIMAT0009683
Description Saccoglossus kowalevskii sko-miR-375 mature miRNA
Sequence 54 - UUUGUUCGUUCGGCUCGCGCGA - 75
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68