miRBase entry: lgi-mir-252b

Stem-loop lgi-mir-252b


Accession
MI0010218
Description
Lottia gigantea lgi-mir-252b precursor miRNA
Gene family
MIPF0000285; mir-252


Sequence

guugucugucaugguaacuAUAAGUAGUGGUGCCGCAGGUAugauauugauggcuaccugcuucaucacuauuuacuguuaaucugauaaugucaccaaga
......(((((.((((((..((((((((((((..((((((((.((....)).).)))))))..))))))))))))..))).))))))))............

Structure
------guuguc     u   -   uA            CC       - g  a 
            uguca ggu aac  UAAGUAGUGGUG  GCAGGUA u au u
            ||||| ||| |||  ||||||||||||  ||||||| | ||  
            auagu cua uug  auuuaucacuac  cguccau g ua u
agaaccacugua     -   a   uc            uu       c g  g 


Annotation confidence Not enough data
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Genome context
KB200702.1: 486110-486210 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from lgi-mir-252b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature lgi-miR-252b

Accession MIMAT0009682
Description Lottia gigantea lgi-miR-252b mature miRNA
Sequence 20 - AUAAGUAGUGGUGCCGCAGGUA - 41
Evidence not_experimental

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68