Stem-loop spu-mir-92a

Accession

MI0010198

Description

Strongylocentrotus purpuratus spu-mir-92a precursor miRNA

Gene family

MIPF0000013; mir-25

Literature search

1 open access papers mention spu-mir-92a
(1 sentences)

Sequence

acgaaucuugucuuguaggucgugacucgugcccaauauucaguguuacugcacaucaaUAUUGCACUUGUCCCGGCCUACUggauagguucuaaucucc
..((((((.((((.((((((((.(((..((((..((((((..((((....))))...))))))))))..))).)))))))).))))))))))........

Structure

------ac      u    u        u   uc    cc      -ca    u 
        gaaucu gucu guaggucg gac  gugc  aauauu   gugu a
        |||||| |||| |||||||| |||  ||||  ||||||   ||||  
        cuugga uagg CAUCCGGC CUG  CACG  UUAUaa   cacg c
ccucuaau      -    U        C   UU    --      cua    u 

Annotation confidence Not enough data

Genome context

KN917153.1: 419786-419885 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from spu-mir-92a

Mature spu-miR-92a

• Accession: MIMAT0009662
• Description: Strongylocentrotus purpuratus spu-miR-92a mature miRNA
• Sequence: 60 - UAUUGCACUUGUCCCGGCCUACU - 82
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68