miRBase entry: spu-mir-7

Stem-loop spu-mir-7


Accession
MI0010187
Description
Strongylocentrotus purpuratus spu-mir-7 precursor miRNA
Gene family
MIPF0000022; mir-7


Sequence

cauaccucuggcccuuUGGAAGACUAGUGAUUUUGUUGUugugaaugucaaagaacuaacaaaaaaucacugucggccacuggggacagaggucca
...(((((((.((((.(((..(((.(((((((((.(((((((............)).)))))))))))))))))..)))..)))).)))))))...

Structure
cau       g    -u   AA   U         G     -  gaaug 
   accucug cccu  UGG  GAC AGUGAUUUU UUGUu gu     u
   ||||||| ||||  |||  ||| ||||||||| ||||| ||      
   uggagac gggg  acc  cug ucacuaaaa aacaa ca     c
acc       a    uc   gg   -         -     u  agaaa 


Annotation confidence Not enough data
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Genome context
KN915738.1: 14118-14213 [-]

Database links

Mature spu-miR-7

Accession MIMAT0009651
Description Strongylocentrotus purpuratus spu-miR-7 mature miRNA
Sequence 17 - UGGAAGACUAGUGAUUUUGUUGU - 39
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68