Stem-loop spu-mir-375

Accession

MI0010184

Description

Strongylocentrotus purpuratus spu-mir-375 precursor miRNA

Gene family

MIPF0000114; mir-375

Literature search

1 open access papers mention spu-mir-375
(8 sentences)

Sequence

cgagcucaacgugcaaaacuugagauaaggucagcuguucggcuggccgcuacaugcuguuUUGUUCGUUCGGCUCGCGUCAAauugcagucacacuauc
((((((.((((.(((((((.........((((((((....))))))))..........))))))).)))).)))))).......................

Structure

-----------------------      c    u       -uugagauaa        g 
                       cgagcu aacg gcaaaac          ggucagcu u
                       |||||| |||| |||||||          ||||||||  
                       GCUCGG UUGC UGUUuug          ccggucgg u
cuaucacacugacguuaAACUGC      C    U       ucguacaucg        c 

Annotation confidence Not enough data

Genome context

KN913128.1: 231515-231614 [-]

Mature spu-miR-375

• Accession: MIMAT0009648
• Description: Strongylocentrotus purpuratus spu-miR-375 mature miRNA
• Sequence: 62 - UUGUUCGUUCGGCUCGCGUCAA - 83
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68