miRBase entry: spu-mir-242

Stem-loop spu-mir-242


Accession
MI0010183
Description
Strongylocentrotus purpuratus spu-mir-242 precursor miRNA
Gene family
MIPF0000731; mir-242_2


Sequence

uguaacaccaugucgggcaUUGCGUAGGCGUUGUGCACAGUguucuuuaaauuacaauugugcaucucauccacguaaaucacggcacuggucacuaauc
......(((((((((....((((((.((.(..(((((((((((..........)).)))))))))..).)).))))))....))))).))))........

Structure
--uguaac    -     ggca      A  C UU         -  ucuu 
        acca ugucg    UUGCGU GG G  GUGCACAGU gu    u
        |||| |||||    |||||| || |  ||||||||| ||     
        uggu acggc    aaugca cu c  uacguguua ca    a
cuaaucac    c     acua      c  a uc         a  uuaa 


Annotation confidence Not enough data
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Genome context
KN913955.1: 171576-171675 [+]

Database links

Mature spu-miR-242

Accession MIMAT0009647
Description Strongylocentrotus purpuratus spu-miR-242 mature miRNA
Sequence 20 - UUGCGUAGGCGUUGUGCACAGU - 41
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68