miRBase entry: sko-mir-315

Stem-loop sko-mir-315


Accession
MI0010178
Description
Saccoglossus kowalevskii sko-mir-315 precursor miRNA
Gene family
MIPF0000141; mir-315


Sequence

ucacauugacucuggcgccgUUUUGAUUGUUGCUCAGAAAGccuuaugcuucuggucggcuuucggguaacaauuaaaaauagcgagagaguuuucaucuc
.......((((((..(((..(((((((((((((((.(((((((..............))))))))))))))))))))))...)))..))))))........

Structure
-ucacauu      gg   -cg               A       uuaugc 
        gacucu  cgc   UUUUGAUUGUUGCUC GAAAGcc      u
        ||||||  |||   ||||||||||||||| |||||||       
        uugaga  gcg   aaaauuaacaauggg cuuucgg      u
cucuacuu      ga   aua               -       cugguc 


Annotation confidence Not enough data
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Genome context
GL015465.1: 353989-354089 [-]

Database links

Mature sko-miR-315

Accession MIMAT0009642
Description Saccoglossus kowalevskii sko-miR-315 mature miRNA
Sequence 21 - UUUUGAUUGUUGCUCAGAAAG - 41
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68