miRBase entry: sko-mir-278

Stem-loop sko-mir-278


Accession
MI0010176
Description
Saccoglossus kowalevskii sko-mir-278 precursor miRNA
Gene family
MIPF0000728; mir-278_2


Sequence

acugucuaacgucugauccgaaggaaugaaagucucgucuaaucgugauauuaaucgagaUCGGUGGGACUUUCGUUCGUUUggaagagacgacauaucac
.........(((((..((((((.((((((((((((((.((.(((.((((....)))).))).)))))))))))))))).))))))..))))).........

Structure
acugucuaa     ga      g              u  a   g    a 
         cgucu  uccgaa gaaugaaagucucg cu auc ugau u
         |||||  |||||| |||||||||||||| || ||| ||||  
         gcaga  aggUUU CUUGCUUUCAGGGU GG Uag gcua u
cacuauaca     ga      G              -  C   a    a 


Annotation confidence Not enough data
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Genome context
GL012314.1: 263009-263109 [-]

Database links

Mature sko-miR-278

Accession MIMAT0009640
Description Saccoglossus kowalevskii sko-miR-278 mature miRNA
Sequence 61 - UCGGUGGGACUUUCGUUCGUUU - 82
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68