miRBase entry: sko-mir-252b

Stem-loop sko-mir-252b


Accession
MI0010175
Description
Saccoglossus kowalevskii sko-mir-252b precursor miRNA
Gene family
MIPF0000285; mir-252


Sequence

uacauugguucuuauccuugCUAAGUAGUAGUGCCGCAGGUAAuuaaaauaaucauuuaccugcucucuacugcuuaacaagguauaaccaaaaaucaucg
....((((((..((.(((((.((((((((((.(..((((((((.............)))))))).).)))))))))).))))))).)))))).........

Structure
-----uaca      cu  u     C          U CC        uuaaa 
         uugguu  ua ccuug UAAGUAGUAG G  GCAGGUAA     a
         ||||||  || ||||| |||||||||| |  ||||||||     u
         aaccaa  au ggaac auucgucauc c  cguccauu     a
gcuacuaaa      -u  -     a          u -u        uacua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
GL013840.1: 19591-19691 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from sko-mir-252b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sko-miR-252b

Accession MIMAT0009639
Description Saccoglossus kowalevskii sko-miR-252b mature miRNA
Sequence 21 - CUAAGUAGUAGUGCCGCAGGUAA - 43
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68