miRBase entry: sko-mir-190

Stem-loop sko-mir-190


Accession
MI0010170
Description
Saccoglossus kowalevskii sko-mir-190 precursor miRNA
Gene family
MIPF0000076; mir-190


Sequence

aaguuuauaccauucgccaugUGAUAUGUUUGUUAUUUGGUUGGUgguuucaccaaaucaaccaguaucagacauauauccauggaguguggaaacucauc
.(((((...((((.(.(((((..(((((((((.((((.((((((((((...))))..)))))))))).)))))))))...))))).).)))))))))....

Structure
---a     aua    u g     -UG         U    U      --    u 
    aguuu   ccau c ccaug   AUAUGUUUG UAUU GGUUGG  Uggu  
    |||||   |||| | |||||   ||||||||| |||| ||||||  |||| u
    ucaaa   ggug g gguac   uauacagac auga ccaacu  acca  
cuac     ---    u a     cua         u    -      aa    c 


Annotation confidence Not enough data
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Genome context
GL012030.1: 20242-20342 [+]

Database links

Mature sko-miR-190

Accession MIMAT0009634
Description Saccoglossus kowalevskii sko-miR-190 mature miRNA
Sequence 22 - UGAUAUGUUUGUUAUUUGGUUGGU - 45
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68