miRBase entry: sko-mir-183

Stem-loop sko-mir-183


Accession
MI0010168
Description
Saccoglossus kowalevskii sko-mir-183 precursor miRNA


Sequence

cgcugugAAUGGCACUGUAUGAAUUCACUGcacucugaucgcuuccaguggauuuuccagugccauuuacaacg
((.((((((((((((((...((((((((((...............))))))))))..)))))))))))))).))

Structure
  c              UAU          cacucu 
cg ugugAAUGGCACUG   GAAUUCACUG      g
|| ||||||||||||||   ||||||||||      a
gc acauuuaccgugac   uuuaggugac      u
  a              -cu          cuucgc 


Annotation confidence Not enough data
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Genome context
GL011980.1: 34330-34403 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from sko-mir-183
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sko-miR-183

Accession MIMAT0009631
Description Saccoglossus kowalevskii sko-miR-183 mature miRNA
Sequence 8 - AAUGGCACUGUAUGAAUUCACUG - 30
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68