miRBase entry: sko-mir-153

Stem-loop sko-mir-153


Accession
MI0010166
Description
Saccoglossus kowalevskii sko-mir-153 precursor miRNA
Gene family
MIPF0000050; mir-153


Sequence

uacuaaccuugccaguggccuagucauuuuugugcauaugcaagcugucaaaucaaucacUUGCAUAGUCACAAAAGUGAUUgggacaagugugcgcacuc
.........(((((.(.(((((((((((((((((..((((((((.((..........))))))))))..)))))))))))))))).).).)).))).....

Structure
uacuaaccu   -  g g -                ca        c  ucaa 
         ugc ca u g ccuagucauuuuugug  uaugcaag ug    a
         ||| || | | ||||||||||||||||  |||||||| ||     
         gcg gu a c gggUUAGUGAAAACAC  AUACGUUc ac    u
----cucac   u  g a a                UG        -  uaac 


Annotation confidence Not enough data
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Genome context
GL018166.1: 97650-97750 [+]

Database links

Mature sko-miR-153

Accession MIMAT0009629
Description Saccoglossus kowalevskii sko-miR-153 mature miRNA
Sequence 61 - UUGCAUAGUCACAAAAGUGAUU - 82
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68