Stem-loop sko-mir-124

Accession

MI0010162

Description

Saccoglossus kowalevskii sko-mir-124 precursor miRNA

Gene family

MIPF0000021; mir-124

Sequence

ggaugguuauguccuguucuaAGUGUUCACAGCGGUCCUUGAUguuccacacaacgcaauUAAGGCACGCGGUGAAUGCCAAgaacaaagauauauaaaau
.......((((((.((((((..((((((((.(((..(((((((...............)))))))..))).))))))))..))))))..))))))......

Structure

ggauggu      -c      aA        A   GU       guucca 
       uauguc  uguucu  GUGUUCAC GCG  CCUUGAU      c
       ||||||  ||||||  |||||||| |||  |||||||      a
       auauag  acaagA  CGUAAGUG CGC  GGAAUua      c
-uaaaau      aa      AC        G   AC       acgcaa 

Annotation confidence Not enough data

Genome context

GL018167.1: 335142-335242 [-]

Mature sko-miR-124-5p

• Accession: MIMAT0009624
• Description: Saccoglossus kowalevskii sko-miR-124-5p mature miRNA
• Sequence: 22 - AGUGUUCACAGCGGUCCUUGAU - 43
• Evidence: experimental ; 454 [1]

Mature sko-miR-124-3p

• Accession: MIMAT0009625
• Description: Saccoglossus kowalevskii sko-miR-124-3p mature miRNA
• Sequence: 61 - UAAGGCACGCGGUGAAUGCCAA - 82
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68