Stem-loop sequence sko-mir-96

AccessionMI0010160 (change log)
DescriptionSaccoglossus kowalevskii miR-96 stem-loop
Stem-loop 
   ----------------------   u    g        -ca        ucuu 
5'                       ccu uuug cacuagca   uuuugcug    u
                         ||| |||| ||||||||   ||||||||    u
3'                       gga gaac gugaucgu   aaagcgac    u
   ggccuacuuuccagcuacugca   c    g        aug        uaua
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Skow_1.1; GCA_000003605.1) Overlapping transcripts
GL011980.1: 36622-36709 [+]
intergenic
Clustered miRNAs
< 10kb from sko-mir-96
sko-mir-183GL011980.1: 34330-34403 [+]
sko-mir-96GL011980.1: 36622-36709 [+]
sko-mir-182GL011980.1: 37036-37113 [+]
Database links

Mature sequence sko-miR-96-5p

Accession MIMAT0009622
Previous IDssko-miR-96
Sequence

5 -  

uuuggcacuagcacauuuugc

 - 25

Get sequence
Evidence experimental; 454 [1]

Mature sequence sko-miR-96-3p

Accession MIMAT0019156
Previous IDssko-miR-96*
Sequence

42 -  

cgaaaguaugcuaguggcaagc

 - 63

Get sequence
Evidence experimental; 454 [2]

References

1
PMID:19196333 "The deep evolution of metazoan microRNAs" Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ Evol Dev. 11:50-68(2009).
2
PMID:21210939 "microRNA complements in deuterostomes: origin and evolution of microRNAs" Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M Evol Dev. 13:15-27(2011).