Stem-loop sko-mir-29a

Accession

MI0010150

Description

Saccoglossus kowalevskii sko-mir-29a precursor miRNA

Gene family

MIPF0000009; mir-29

Sequence

agaauguuguuauaaugggagacuggcuuuauuuggugcauggaguacacuuucauccucUAGCACCAUAUGAAAUCAGUUUuccauagugacauu
.......((((((.((((((((((((.(((((.((((((.(((((............))))))))))).))))).)))))))))))).))))))..

Structure

agaaugu      a            c     u      a     uacac 
       uguuau augggagacugg uuuau uggugc uggag     u
       |||||| |||||||||||| ||||| |||||| |||||      
       acagug uaccuUUUGACU AAGUA ACCACG AUcuc     u
-----uu      a            A     U      -     cuacu 

Annotation confidence Not enough data

Genome context

GL011876.1: 294682-294777 [+]

Mature sko-miR-29a

• Accession: MIMAT0009612
• Description: Saccoglossus kowalevskii sko-miR-29a mature miRNA
• Sequence: 61 - UAGCACCAUAUGAAAUCAGUUU - 82
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68