miRBase entry: lgi-let-7

Stem-loop lgi-let-7

Accession

MI0010143

Description

Lottia gigantea lgi-let-7 precursor miRNA

Gene family

MIPF0000002; let-7

Sequence

aaucuuuugugaauucggauUGAGGUAGUAGGUUGUAUAGUUgagaauuacaccuagacuggcgaacuguacaaccuucuagcuuucccugagucacaaac
.....(((((((.(((((...(((.(((.(((((((((((((........(.((......)).)))))))))))))).))).)))...)))))))))))).

Structure

aaucu       a     auU   G   U             gagaauua a  ua 
     uuuguga uucgg   GAG UAG AGGUUGUAUAGUU        c cc  g
     ||||||| |||||   ||| ||| |||||||||||||        | ||   
     aaacacu gaguc   uuc auc uccaacaugucaa        g gg  a
----c       -     ccu   g   u             -------- c  uc

Annotation confidence Not enough data

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Genome context

KB200869.1: 2791958-2792058 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from lgi-let-7

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature lgi-let-7

Accession	MIMAT0009604
Description	Lottia gigantea lgi-let-7 mature miRNA
Sequence	21 - UGAGGUAGUAGGUUGUAUAGUU - 42
Evidence	not_experimental

References

PubMed ID: 19196333
The deep evolution of metazoan microRNAs
"Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
"Evol Dev (2009) 11:50-68