miRBase entry: lgi-mir-279

Stem-loop lgi-mir-279


Accession
MI0010134
Description
Lottia gigantea lgi-mir-279 precursor miRNA
Gene family
MIPF0000184; mir-279


Sequence

ggcagagguuaaccgauaaaugggugauugugagucuggugcauguucaugaugacgucaUGACUAGAUCCACACUCAUCCAcagaagcgggaaaaaucau
....((..((..(((.....(((((((.((((.(((((((.((((.(((...)))...))))))))))).)))).)))))))......)))..))..))..

Structure
ggca  gg  aa   -auaaa       u    a       g    --u   u 
    ga  uu  ccg      uggguga ugug gucuggu caug   uca  
    ||  ||  |||      ||||||| |||| ||||||| ||||   ||| g
    cu  aa  ggc      ACCUACU ACAC UAGAUCA GUac   agu  
--ua  aa  ag   gaagac       C    C       -    ugc   a 


Annotation confidence Not enough data
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Genome context
KB203275.1: 133209-133309 [-]

Database links

Mature lgi-miR-279

Accession MIMAT0009593
Description Lottia gigantea lgi-miR-279 mature miRNA
Sequence 61 - UGACUAGAUCCACACUCAUCCA - 82
Evidence not_experimental

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68