Stem-loop lgi-mir-242a

Accession

MI0010131

Description

Lottia gigantea lgi-mir-242a precursor miRNA

Gene family

MIPF0000731; mir-242_2

Sequence

gacaggaauaagguuuUUGCGUAGGCGUUGUGCACAGuuaaauagauauuguguauucccccuaagcaucaaauuuuauuacuaga
...((..(((((((((.(((.((((.(..(((((((((.........)))))))))..).)))).)))..)))))))))..))...

Structure

gac  ga         -U   G    C UU         uaa 
   ag  auaagguuu  UGC UAGG G  GUGCACAGu   a
   ||  |||||||||  ||| |||| |  |||||||||   u
   uc  uauuuuaaa  acg aucc c  uauguguua   a
aga  au         cu   a    c cu         uag 

Annotation confidence Not enough data

Genome context

KB200869.1: 1142651-1142736 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from lgi-mir-242a

Mature lgi-miR-242a

• Accession: MIMAT0009590
• Description: Lottia gigantea lgi-miR-242a mature miRNA
• Sequence: 17 - UUGCGUAGGCGUUGUGCACAG - 37
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68