Stem-loop sequence lgi-mir-216b

Accession

MI0010130 (change log)

Description

Lottia gigantea miR-216b stem-loop

Gene family

MIPF0000054; mir-216

Stem-loop

   ucug          ug u         uuac 
5'     uaauaucagc  g aauccugag    u
       ||||||||||  | |||||||||    g
3'     auuauaguug  u uuaggacuc    a
   acaa          gu -         uauu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Helro1; GCA_000327385.1): KB201459.1: 805719-805782 [+]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from lgi-mir-216b

• lgi-mir-216b: KB201459.1: 805719-805782 [+]
• lgi-mir-216a: KB201459.1: 807321-807413 [+]
• lgi-mir-12: KB201459.1: 809251-809351 [+]

Database links

• miRBase Tracker:MI0010130

Mature sequence lgi-miR-216b

• Accession: MIMAT0009589
• Sequence: 5 - uaauaucagcugguaauccugag - 27
• Evidence: not experimental

References

1. PMID:19196333 "The deep evolution of metazoan microRNAs" Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ Evol Dev. 11:50-68(2009).