miRBase entry: lgi-mir-216b

Stem-loop lgi-mir-216b

Accession

MI0010130

Description

Lottia gigantea lgi-mir-216b precursor miRNA

Gene family

MIPF0000054; mir-216

Sequence

ucugUAAUAUCAGCUGGUAAUCCUGAGuuacugauuaucucaggauuuugguugauauuaaaca
....(((((((((((((.(((((((((...........))))))))))))))))))))))....

Structure

ucug             U         uuac 
    UAAUAUCAGCUGG AAUCCUGAG    u
    ||||||||||||| |||||||||    g
    auuauaguugguu uuaggacuc    a
acaa             -         uauu

Annotation confidence Not enough data

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Genome context

KB201459.1: 805719-805782 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from lgi-mir-216b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature lgi-miR-216b

Accession	MIMAT0009589
Description	Lottia gigantea lgi-miR-216b mature miRNA
Sequence	5 - UAAUAUCAGCUGGUAAUCCUGAG - 27
Evidence	not_experimental

References

PubMed ID: 19196333
The deep evolution of metazoan microRNAs
"Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
"Evol Dev (2009) 11:50-68