miRBase entry: lgi-mir-216a

Stem-loop lgi-mir-216a


Accession
MI0010129
Description
Lottia gigantea lgi-mir-216a precursor miRNA
Gene family
MIPF0000054; mir-216


Sequence

ucuugauguuugugUAAUCUCAGCUGGUAAUUCUGAGuucuaauaaauacuaauuuucucaaguuacuugccgagauuauauaaauauuacgu
...((((((((((((((((((.((.(((((((.((((....................))))))))))).)).))))))))))))))))))...

Structure
ucu                  A  U       C    uucuaauaa 
   ugauguuugugUAAUCUC GC GGUAAUU UGAG         a
   |||||||||||||||||| || ||||||| ||||          
   auuauaaauauauuagag cg ucauuga acuc         u
ugc                  c  u       -    uuuuaauca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB201459.1: 807321-807413 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from lgi-mir-216a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature lgi-miR-216a

Accession MIMAT0009588
Description Lottia gigantea lgi-miR-216a mature miRNA
Sequence 15 - UAAUCUCAGCUGGUAAUUCUGAG - 37
Evidence not_experimental

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68