miRBase entry: lgi-mir-12

Stem-loop lgi-mir-12

Accession

MI0010107

Description

Lottia gigantea lgi-mir-12 precursor miRNA

Sequence

ugaccaugacaucauugccgUGAGUAUUACAUCAGGUACUGAggaaugucucggucaguaccuucugucauauucuaagugaugacgucuuucccagcacc
.......(((.(((((((...((((((.(((..(((((((((.((.....))..)))))))))..))).))))))...))))))).)))............

Structure

-----ugaccau   a       cgU      U   UC         -g  a 
            gac ucauugc   GAGUAU ACA  AGGUACUGA  ga u
            ||| |||||||   |||||| |||  |||||||||  || g
            cug aguagug   cuuaua ugu  uccaugacu  cu u
ccacgacccuuu   c       aau      c   cu         gg  c

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

KB201459.1: 809251-809351 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from lgi-mir-12

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature lgi-miR-12

Accession	MIMAT0009564
Description	Lottia gigantea lgi-miR-12 mature miRNA
Sequence	21 - UGAGUAUUACAUCAGGUACUGA - 42
Evidence	not_experimental

References

PubMed ID: 19196333
The deep evolution of metazoan microRNAs
"Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
"Evol Dev (2009) 11:50-68