miRBase entry: lgi-mir-9

Stem-loop lgi-mir-9


Accession
MI0010105
Description
Lottia gigantea lgi-mir-9 precursor miRNA
Gene family
MIPF0000014; mir-9


Sequence

aagugaaagcucuguuuuugUCUUUGGUUAUCUAGCUGUAUGAuugaaauagaaacauuAUAAAGCUAGGUUACCAAAGGCaaaaauggugacuauacucua
.((((..(((.(((((((((((((((((.((((((((.((((((............)))))).)))))))).))))))))))))))))).).)).))))...

Structure
--a    aa  - u                 U        G      ugaaa 
   agug  ag c cuguuuuugUCUUUGGU AUCUAGCU UAUGAu     u
   ||||  || | ||||||||||||||||| |||||||| ||||||      
   ucau  uc g gguaaaaaCGGAAACCA UGGAUCGA AUAuua     a
auc    -a  a u                 U        A      caaag 


Annotation confidence Not enough data
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Genome context
KB200521.1: 1751408-1751509 [+]

Database links

Mature lgi-miR-9-5p

Accession MIMAT0009562
Description Lottia gigantea lgi-miR-9-5p mature miRNA
Sequence 21 - UCUUUGGUUAUCUAGCUGUAUGA - 43
Evidence not_experimental

Mature lgi-miR-9-3p

Accession MIMAT0009572
Description Lottia gigantea lgi-miR-9-3p mature miRNA
Sequence 60 - AUAAAGCUAGGUUACCAAAGGC - 81
Evidence not_experimental

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68