miRBase entry: cte-mir-252b

Stem-loop cte-mir-252b


Accession
MI0010081
Description
Capitella teleta cte-mir-252b precursor miRNA
Gene family
MIPF0000285; mir-252


Sequence

ugcaucucacugugacagugCUAAGUAGUAGUGCCGCAGGUAauacguuaugauuuaccugcacucugcugcuuaacacaagcacgcgugaauaacaacau
......((((((((...(((.((((((((((.(..((((((((...........)))))))).).)))))))))).)))...)))).))))..........

Structure
----ugcauc    -    aca   C          U CC        uacg 
          ucac ugug   gug UAAGUAGUAG G  GCAGGUAa    u
          |||| ||||   ||| |||||||||| |  ||||||||    u
          agug gcac   cac auucgucguc c  cguccauu    a
uacaacaaua    c    gaa   a          u -a        uagu 


Annotation confidence Not enough data
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Genome context
KB302014.1: 190685-190785 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from cte-mir-252b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cte-miR-252b

Accession MIMAT0009537
Description Capitella teleta cte-miR-252b mature miRNA
Sequence 21 - CUAAGUAGUAGUGCCGCAGGUA - 42
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68