miRBase entry: cte-mir-216a

Stem-loop cte-mir-216a


Accession
MI0010079
Description
Capitella teleta cte-mir-216a precursor miRNA
Gene family
MIPF0000054; mir-216


Sequence

uaauugucUAAUCUCAGUUGGUAAUUCAGAgugcuggaauucguucucggauuaacagcugggaucggacaaaua
...((((((.((((((((((.((((((.(((.((........)).))))))))).)))))))))).))))))...

Structure
uaa      A          G      A   u  ugg 
   uugucU AUCUCAGUUG UAAUUC GAg gc   a
   |||||| |||||||||| |||||| ||| ||    
   aacagg uagggucgac auuagg cuc ug   a
aua      c          a      -   u  cuu 


Annotation confidence Not enough data
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Genome context
KB297336.1: 34749-34823 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from cte-mir-216a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cte-miR-216a

Accession MIMAT0009535
Description Capitella teleta cte-miR-216a mature miRNA
Sequence 9 - UAAUCUCAGUUGGUAAUUCAGA - 30
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68