miRBase entry: cte-mir-210a

Stem-loop cte-mir-210a


Accession
MI0010078
Description
Capitella teleta cte-mir-210a precursor miRNA


Sequence

acggcgugugcguuggucauugcgcuacgcacaaagaagaugcgcugcuugauuucacUUUGUGCGUGUGACAGUGACAAUgcacgcacgucacugcuuc
..(((((((((((((.(((((((((.((((((((((..((..((.....))..))..))))))))))))).))))))))))))..)))))))........

Structure
------ac       --      g      -   u          aa  ug  c 
        ggcgugu  gcguug ucauug cgc acgcacaaag  ga  cg u
        |||||||  |||||| |||||| ||| ||||||||||  ||  || g
        cugcacg  cgUAAC AGUGAC GUG UGCGUGUUUc  uu  gu c
cuucguca       ca      -      A   -          ac  ua  u 


Annotation confidence Not enough data
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Genome context
KB309457.1: 19520-19619 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cte-mir-210a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cte-miR-210a

Accession MIMAT0009534
Description Capitella teleta cte-miR-210a mature miRNA
Sequence 59 - UUUGUGCGUGUGACAGUGACAAU - 81
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68