miRBase entry: cte-mir-184a

Stem-loop cte-mir-184a


Accession
MI0010074
Description
Capitella teleta cte-mir-184a precursor miRNA
Gene family
MIPF0000059; mir-184


Sequence

caucacucgaucgcacgauuccuuaccauuucuuuguccgguccgugugauuaucaucacUGGACGGAGAACUGAUAAGGGCcugugacgaccacgagccu
.....((((.(((((((..((((((.((.(((((((((((((..(((.......))).))))))))))))).)).))))))..)))).)))...))))...

Structure
cauca    --a   -    au      c  u             cc   ug 
     cucg   ucg cacg  uccuua ca uucuuuguccggu  gug  a
     ||||   ||| ||||  |||||| || |||||||||||||  |||  u
     gagc   agc gugu  GGGAAU GU AAGAGGCAGGUca  uac  u
--ucc    acc   a    cC      A  C             -c   ua 


Annotation confidence Not enough data
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Genome context
KB301807.1: 120185-120285 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cte-mir-184a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cte-miR-184a

Accession MIMAT0009530
Description Capitella teleta cte-miR-184a mature miRNA
Sequence 61 - UGGACGGAGAACUGAUAAGGGC - 82
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68