miRBase entry: cte-mir-133

Stem-loop cte-mir-133


Accession
MI0010070
Description
Capitella teleta cte-mir-133 precursor miRNA
Gene family
MIPF0000029; mir-133


Sequence

ucguagcgcacgccguagcugguugaaacugggucaaauugugcgcugcuugcgguucauUUGGUCCCCUUCAACCAGCUGUgggugcgcgccacucgcua
.....((((((.(((((((((((((((...(((((((((....(((.....)))....)))))).))).)))))))))))))))))))))((.....))..

Structure
------ucgua      g               acu   -      ugug   u 
           gcgcac ccguagcugguugaa   ggg ucaaau    cgc g
           |||||| |||||||||||||||   ||| ||||||    ||| c
           cgcgug ggUGUCGACCAACUU   CCC GGUUua    gcg u
aucgcucaccg      -               --C   U      cuug   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB301107.1: 99075-99175 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cte-mir-133
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cte-miR-133

Accession MIMAT0009526
Description Capitella teleta cte-miR-133 mature miRNA
Sequence 61 - UUGGUCCCCUUCAACCAGCUGU - 82
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68