miRBase entry: cte-mir-92b

Stem-loop cte-mir-92b


Accession
MI0010065
Description
Capitella teleta cte-mir-92b precursor miRNA


Sequence

cgcauggcgucguugaaucggaggguccggauggugcaaguuguuaaaacaaguuggucaAAUUGCACUGUUCCCGGCCUGCugaucucacucggccgaua
...((.(.((((.((((((((.(((((.(((((((((((.(((((((......)))).))).)))))))).))).))))).))))).)))..))))).)).

Structure
cgc  g c    -u   -     a     c   -        g   -    aa 
   au g gucg  uga aucgg ggguc gga uggugcaa uug uuaa  c
   || | ||||  ||| ||||| ||||| ||| |||||||| ||| ||||   
   ua c cggc  acu uaguC UCCGG CCU GUCACGUU Aac gguu  a
--a  g -    uc   c     G     C   U        A   u    ga 


Annotation confidence Not enough data
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Genome context
KB294417.1: 595219-595319 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from cte-mir-92b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cte-miR-92b

Accession MIMAT0009521
Description Capitella teleta cte-miR-92b mature miRNA
Sequence 61 - AAUUGCACUGUUCCCGGCCUGC - 82
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68